Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rrna cytosine-c5-methylase | LK406_04645 | A3QDA2 | Negative | 1156307 - 1157683 | 49430.1 |
| deoxynucleoside kinase | LK406_04650 | P37529 | Negative | 1157686 - 1158303 | 23976.0 |
| gh3 auxin-responsive promoter family protein | LK406_04655 | A3BLS0 | Negative | 1158322 - 1159806 | 57231.1 |
| trk system potassium transporter trka | LK406_04660 | P0AGJ0 | Negative | 1159894 - 1161231 | 48733.1 |
| hypothetical protein | LK406_04665 | Not Available | Positive | 1161365 - 1161631 | 9157.07 |
| 3'(2'),5'-bisphosphate nucleotidase cysq | LK406_04670 | Q8Z153 | Negative | 1161680 - 1162525 | 31939.0 |
| hypothetical protein | LK406_04675 | Not Available | Negative | 1162611 - 1163531 | 33209.8 |
| hypothetical protein | LK406_04680 | Not Available | Negative | 1163528 - 1164472 | 35055.7 |
| response regulator transcription factor | LK406_04685 | Q00934 | Negative | 1164469 - 1164837 | 13922.2 |
| 50s ribosomal protein l21 | LK406_04690 | A5FJP5 | Positive | 1164992 - 1165303 | 11640.4 |
Pathways
1231 pathways
Health Effects
No health effects information available for this bacterium.
