Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | NQ519_01920 | Not Available | Negative | 486991 - 487563 | 20929.4 |
| Trna-arg | Not Available | Not Available | Positive | 487664 - 487738 | Not Available |
| port family protein | NQ519_01930 | Not Available | Negative | 487959 - 489293 | 47058.3 |
| sigma-70 family rna polymerase sigma factor | NQ519_01935 | P0AGB8 | Negative | 489303 - 489851 | 21008.1 |
| nigd-like protein | NQ519_01940 | Not Available | Positive | 489987 - 490712 | 27024.5 |
| glycoside hydrolase family 3 c-terminal domain-containing protein | NQ519_01945 | T2KMH0 | Positive | 490899 - 493313 | 88928.6 |
| holliday junction branch migration dna helicase ruvb | NQ519_01950 | A6KZW5 | Positive | 493401 - 494408 | 36680.3 |
| malate dehydrogenase | NQ519_01955 | E1V8J1 | Positive | 494716 - 495996 | 46173.7 |
| 3-dehydroquinate synthase | NQ519_01960 | A1AQL5 | Negative | 496070 - 497086 | 36592.4 |
| translational gtpase typa | NQ519_01965 | P0A3B2 | Positive | 497168 - 498970 | 66923.8 |
Pathways
1348 pathways
Health Effects
No health effects information available for this bacterium.
