Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycoside hydrolase family 88 protein | LK406_04545 | P9WF04 | Positive | 1129202 - 1130305 | 42086.3 |
| bacon domain-containing protein | LK406_04550 | Not Available | Positive | 1130364 - 1132049 | 61579.8 |
| susc/raga family tonb-linked outer membrane protein | LK406_04555 | T2KPJ3 | Positive | 1132198 - 1135296 | 114485.0 |
| ragb/susd family nutrient uptake outer membrane protein | LK406_04560 | T2KN63 | Positive | 1135318 - 1137171 | 69911.6 |
| susc/raga family tonb-linked outer membrane protein | LK406_04565 | T2KM18 | Positive | 1137181 - 1140075 | 108013.0 |
| ragb/susd family nutrient uptake outer membrane protein | LK406_04570 | T2KPM5 | Positive | 1140088 - 1141845 | 66404.8 |
| duf1735 domain-containing protein | LK406_04575 | Not Available | Positive | 1141859 - 1142893 | 37794.0 |
| polysaccharide lyase beta-sandwich domain-containing protein | LK406_04580 | Q59288 | Positive | 1142904 - 1145069 | 80315.6 |
| family 43 glycosylhydrolase | LK406_04585 | P94522 | Positive | 1145093 - 1146082 | 36563.5 |
| electron transport complex subunit rsxa | LK406_04590 | H6LC28 | Negative | 1146435 - 1147013 | 20608.5 |
Pathways
1231 pathways
Health Effects
No health effects information available for this bacterium.
