Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 7-carboxy-7-deazaguanine synthase quee | LK406_04495 | A6H1N2 | Negative | 1112600 - 1113235 | 23693.4 |
| hypoxanthine phosphoribosyltransferase | LK406_04500 | Q97TC4 | Negative | 1113235 - 1113777 | 20255.6 |
| hypothetical protein | LK406_04505 | Not Available | Negative | 1114024 - 1114884 | 30574.5 |
| ragb/susd family nutrient uptake outer membrane protein | LK406_04510 | Not Available | Negative | 1114921 - 1116462 | 57047.3 |
| tonb-dependent receptor | LK406_04515 | T2KPJ3 | Negative | 1116479 - 1119571 | 113247.0 |
| site-specific integrase | LK406_04520 | P46352 | Negative | 1119816 - 1121042 | 47206.9 |
| hypothetical protein | LK406_04525 | Not Available | Negative | 1121030 - 1121287 | 9790.96 |
| heparinase ii/iii-family protein | LK406_04530 | Not Available | Positive | 1121277 - 1123463 | 80783.2 |
| response regulator | LK406_04535 | T2KMF4 | Positive | 1123579 - 1127601 | 150038.0 |
| bnr repeat-containing protein | LK406_04540 | A0A084JZA8 | Positive | 1127719 - 1129149 | 54844.2 |
Pathways
1231 pathways
Health Effects
No health effects information available for this bacterium.
