Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamate-5-semialdehyde dehydrogenase | LK406_04445 | A6LE74 | Positive | 1102360 - 1103616 | 44663.4 |
| fluoride efflux transporter crcb | LK406_04450 | Q72V37 | Positive | 1103725 - 1104099 | 12666.7 |
| acetate kinase | LK406_04455 | A6TRU6 | Positive | 1104310 - 1105512 | 43495.3 |
| phosphate butyryltransferase | LK406_04460 | P58255 | Positive | 1105549 - 1106457 | 32505.0 |
| butyrate kinase | LK406_04465 | Q8A4P5 | Positive | 1106504 - 1107571 | 38735.3 |
| lipopolysaccharide biosynthesis protein | LK406_04470 | P33699 | Negative | 1107606 - 1109066 | 53226.9 |
| pyruvate kinase | LK406_04475 | O51323 | Negative | 1109078 - 1110553 | 54702.1 |
| type ii 3-dehydroquinate dehydratase | LK406_04480 | B3E9N5 | Negative | 1110750 - 1111175 | 15301.3 |
| thiamine-phosphate kinase | LK406_04485 | Q8XE87 | Positive | 1111354 - 1112292 | 32759.8 |
| septum formation initiator family protein | LK406_04490 | Not Available | Negative | 1112324 - 1112599 | 11022.4 |
Pathways
1231 pathways
Health Effects
No health effects information available for this bacterium.
