Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| class i sam-dependent rrna methyltransferase | LK406_04395 | A0KKF0 | Positive | 1088229 - 1089428 | 44477.8 |
| esterase family protein | LK406_04400 | D5EXZ4 | Positive | 1089432 - 1090277 | 31413.5 |
| hypothetical protein | LK406_04405 | Not Available | Negative | 1090319 - 1091173 | 29463.4 |
| superoxide dismutase | LK406_04410 | Not Available | Negative | 1091435 - 1092289 | 31458.4 |
| membrane protein insertase yidc | LK406_04415 | A6L9D2 | Negative | 1092388 - 1094337 | 73638.7 |
| ctp synthase | LK406_04420 | Q11S24 | Negative | 1094373 - 1095995 | 59448.9 |
| duf349 domain-containing protein | LK406_04425 | A5U683 | Negative | 1096007 - 1098181 | 82400.8 |
| dead/deah box helicase | LK406_04430 | Q8Y8N0 | Negative | 1098365 - 1100344 | 73985.9 |
| response regulator transcription factor | LK406_04435 | P35163 | Positive | 1100472 - 1101143 | 25071.8 |
| glutamate 5-kinase | LK406_04440 | Q8A1E7 | Positive | 1101267 - 1102358 | 38922.8 |
Pathways
1231 pathways
Health Effects
No health effects information available for this bacterium.
