Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | LK406_04345 | Q5XBB2 | Positive | 1076911 - 1078119 | 43021.6 |
| hypothetical protein | LK406_04350 | Not Available | Negative | 1078168 - 1079121 | 35089.8 |
| mbl fold metallo-hydrolase | LK406_04355 | A7HKQ7 | Positive | 1079428 - 1080150 | 26568.6 |
| heavy-metal-associated domain-containing protein | LK406_04360 | Not Available | Negative | 1080294 - 1080608 | 11036.8 |
| tonb-dependent receptor | LK406_04365 | Q8A1G1 | Negative | 1080654 - 1083023 | 88671.9 |
| hypothetical protein | LK406_04370 | Not Available | Negative | 1083093 - 1083506 | 14881.2 |
| hypothetical protein | LK406_04375 | Not Available | Positive | 1083950 - 1084909 | 37774.1 |
| giy-yig nuclease family protein | LK406_04380 | Not Available | Positive | 1084920 - 1085507 | 22080.6 |
| recq family atp-dependent dna helicase | LK406_04385 | P15043 | Positive | 1085594 - 1087564 | 74039.0 |
| 3'-5' exonuclease domain-containing protein 2 | LK406_04390 | O09053 | Positive | 1087624 - 1088232 | 22884.9 |
Pathways
1231 pathways
Health Effects
No health effects information available for this bacterium.
