Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetyl-coa hydrolase/transferase family protein | LK406_04295 | P38942 | Positive | 1065647 - 1066966 | 47397.9 |
| m48 family metallopeptidase | LK406_04300 | P25894 | Positive | 1067157 - 1067963 | 28711.0 |
| endonuclease viii | LK406_04305 | A9HI30 | Negative | 1068052 - 1068879 | 30037.1 |
| 5s ribosomal rna | Not Available | Not Available | Positive | 1069255 - 1069368 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | Positive | 1069474 - 1072346 | Not Available |
| 16s ribosomal rna | Not Available | Not Available | Positive | 1072533 - 1074060 | Not Available |
| hypothetical protein | LK406_04325 | P32167 | Positive | 1074640 - 1075269 | 22589.8 |
| mgtc/sapb family protein | LK406_04330 | P0AFV3 | Negative | 1075328 - 1075999 | 24215.6 |
| 50s ribosomal protein l35 | LK406_04335 | Q8AAP0 | Positive | 1076207 - 1076401 | 7232.05 |
| 50s ribosomal protein l20 | LK406_04340 | A0LYZ0 | Positive | 1076492 - 1076836 | 12722.9 |
Pathways
1231 pathways
Health Effects
No health effects information available for this bacterium.
