Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | LK406_04195 | Not Available | Positive | 1038907 - 1040718 | 68230.7 |
| duf5110 domain-containing protein | LK406_04200 | Q9P999 | Positive | 1040715 - 1043075 | 88565.0 |
| duf4982 domain-containing protein | LK406_04205 | T2KPJ7 | Positive | 1043072 - 1045711 | 99139.3 |
| sialate o-acetylesterase | LK406_04210 | Q8L9J9 | Positive | 1045717 - 1046604 | 31853.2 |
| hypothetical protein | LK406_04215 | P48840 | Positive | 1046631 - 1048160 | 57066.4 |
| nudix hydrolase | LK406_04220 | Q58549 | Positive | 1048386 - 1049132 | 28364.6 |
| carbohydrate kinase | LK406_04225 | P09099 | Positive | 1049312 - 1050799 | 53717.2 |
| xylose isomerase | LK406_04230 | Q8A9M2 | Positive | 1050819 - 1052132 | 49437.8 |
| d-xylose transporter xyle | LK406_04235 | P0AGF5 | Positive | 1052194 - 1053609 | 50862.1 |
| potassium/proton antiporter | LK406_04240 | Q1IG71 | Negative | 1053902 - 1055398 | 54384.1 |
Pathways
1231 pathways
Health Effects
No health effects information available for this bacterium.
