Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4141 domain-containing protein | LK406_04045 | Not Available | Positive | 1008694 - 1009323 | 24011.1 |
| conjugative transposon protein traj | LK406_04050 | Not Available | Positive | 1009358 - 1010416 | 38842.7 |
| conjugative transposon protein trak | LK406_04055 | Not Available | Positive | 1010426 - 1011049 | 23979.7 |
| tral conjugative transposon family protein | LK406_04060 | Not Available | Positive | 1011054 - 1011371 | 12532.0 |
| conjugative transposon protein tram | LK406_04065 | Not Available | Positive | 1011322 - 1012671 | 49368.4 |
| conjugative transposon protein tran | LK406_04070 | Not Available | Positive | 1012749 - 1013747 | 37718.3 |
| conjugal transfer protein trao | LK406_04075 | Not Available | Positive | 1013750 - 1014331 | 21435.5 |
| fimb/mfa2 family fimbrial subunit | LK406_04080 | Not Available | Positive | 1014387 - 1015400 | 35315.2 |
| duf4906 domain-containing protein | LK406_04085 | Not Available | Positive | 1015470 - 1017305 | 68286.0 |
| duf3575 domain-containing protein | LK406_04090 | Not Available | Positive | 1017317 - 1017853 | 20030.1 |
Pathways
1231 pathways
Health Effects
No health effects information available for this bacterium.
