Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| relaxase/mobilization nuclease domain-containing protein | LK406_03995 | Not Available | Negative | 998302 - 999549 | 46544.6 |
| hypothetical protein | LK406_04000 | Not Available | Negative | 999528 - 999956 | 16428.1 |
| para family protein | LK406_04005 | Not Available | Positive | 1000616 - 1001371 | 28070.2 |
| duf3408 domain-containing protein | LK406_04010 | Not Available | Positive | 1001376 - 1001789 | 16174.1 |
| conjugal transfer protein trad | LK406_04015 | Not Available | Positive | 1001793 - 1002515 | 26242.7 |
| duf4134 domain-containing protein | LK406_04020 | Not Available | Positive | 1002660 - 1002959 | 10258.5 |
| duf4133 domain-containing protein | LK406_04025 | Not Available | Positive | 1002971 - 1003309 | 12829.0 |
| superoxide dismutase | LK406_04030 | P18004 | Positive | 1003293 - 1005677 | 91536.0 |
| group ii intron reverse transcriptase/maturase | LK406_04035 | P0A3U0 | Positive | 1006238 - 1008061 | 70901.0 |
| duf3876 domain-containing protein | LK406_04040 | Not Available | Positive | 1008306 - 1008671 | 13714.5 |
Pathways
1231 pathways
Health Effects
No health effects information available for this bacterium.
