Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfa1 family fimbria major subunit | LK406_03845 | Not Available | Positive | 967221 - 968564 | 48507.9 |
| fimb/mfa2 family fimbrial subunit | LK406_03850 | B2RHG2 | Positive | 968604 - 969518 | 34027.6 |
| fimb/mfa2 family fimbrial subunit | LK406_03855 | Not Available | Positive | 969553 - 971103 | 56658.6 |
| hypothetical protein | LK406_03860 | Not Available | Positive | 971148 - 974078 | 106354.0 |
| hypothetical protein | LK406_03865 | Not Available | Positive | 974175 - 974765 | 22096.0 |
| four helix bundle protein | LK406_03870 | Not Available | Positive | 974734 - 975120 | 15222.7 |
| retron-type reverse transcriptase | LK406_03875 | Q47688 | Positive | 977710 - 978990 | 50853.6 |
| pepsy-like domain-containing protein | LK406_03880 | Not Available | Positive | 979008 - 979463 | 17152.4 |
| hypothetical protein | LK406_03885 | Not Available | Positive | 979485 - 979961 | 17764.7 |
| hypothetical protein | LK406_03890 | Not Available | Positive | 979973 - 980161 | 7697.83 |
Pathways
1231 pathways
Health Effects
No health effects information available for this bacterium.
