Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fimbrillin family protein | LK406_03795 | Not Available | Negative | 955076 - 956173 | 39160.5 |
| fimbrillin family protein | LK406_03800 | Not Available | Negative | 956330 - 957448 | 40442.7 |
| fimbrillin family protein | LK406_03805 | Not Available | Negative | 957536 - 958714 | 42766.1 |
| duf5119 domain-containing protein | LK406_03810 | A7LXW1 | Negative | 958755 - 959735 | 36076.0 |
| duf3575 domain-containing protein | LK406_03815 | Not Available | Negative | 959732 - 961063 | 49906.2 |
| rrf2 family transcriptional regulator | LK406_03820 | Q7N223 | Negative | 961115 - 961597 | 18098.1 |
| site-specific integrase | LK406_03825 | Q9V1P5 | Negative | 961867 - 963111 | 47898.7 |
| hypothetical protein | LK406_03830 | Not Available | Positive | 964382 - 964849 | 16050.9 |
| recombinase family protein | LK406_03835 | P04130 | Negative | 964858 - 965532 | 25895.8 |
| duf3575 domain-containing protein | LK406_03840 | Not Available | Positive | 965849 - 967123 | 49502.4 |
Pathways
1231 pathways
Health Effects
No health effects information available for this bacterium.
