Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | LK406_03695 | Not Available | Positive | 930222 - 930563 | 13500.4 |
| helix-turn-helix domain-containing protein | LK406_03700 | Not Available | Positive | 930560 - 930889 | 13140.9 |
| duf3945 domain-containing protein | LK406_03705 | Not Available | Positive | 931012 - 932475 | 55232.2 |
| topoisomerase c-terminal repeat-containing protein | LK406_03710 | Q81IH1 | Positive | 932544 - 934637 | 77644.3 |
| hypothetical protein | LK406_03715 | Not Available | Negative | 934758 - 935174 | 14955.9 |
| duf1896 domain-containing protein | LK406_03720 | Not Available | Positive | 935233 - 935673 | 16593.2 |
| n-6 dna methylase | LK406_03725 | Q71TF8 | Positive | 935663 - 941296 | 212358.0 |
| gnat family n-acetyltransferase | LK406_03730 | P19997 | Negative | 941477 - 941923 | 17648.0 |
| atp-binding protein | LK406_03735 | Q60260 | Positive | 942244 - 943656 | 54733.3 |
| site-specific integrase | LK406_03740 | P46352 | Positive | 944032 - 945327 | 49710.1 |
Pathways
1231 pathways
Health Effects
No health effects information available for this bacterium.
