Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adp-ribosylglycohydrolase family protein | LK406_03645 | Not Available | Negative | 916718 - 918235 | 56695.3 |
| grp family sugar transporter | LK406_03650 | Q9ZPR7 | Negative | 918269 - 919279 | 35376.1 |
| ribokinase | LK406_03655 | P0A9J7 | Negative | 919319 - 920230 | 31769.2 |
| laci family transcriptional regulator | LK406_03660 | P37947 | Positive | 920699 - 921724 | 37877.8 |
| atp-binding cassette domain-containing protein | LK406_03665 | O31716 | Negative | 921841 - 923454 | 60794.3 |
| 2-oxoacid:acceptor oxidoreductase subunit alpha | LK406_03670 | O53182 | Positive | 923904 - 925748 | 66613.7 |
| 2-oxoacid:ferredoxin oxidoreductase subunit beta | LK406_03675 | O53181 | Positive | 925751 - 926782 | 37965.3 |
| Trna-ala | Not Available | Not Available | Positive | 926896 - 926969 | Not Available |
| site-specific integrase | LK406_03685 | Q71Y59 | Positive | 927274 - 928506 | 47398.9 |
| fic family protein | LK406_03690 | Q9BVA6 | Positive | 929018 - 930055 | 38757.5 |
Pathways
1231 pathways
Health Effects
No health effects information available for this bacterium.
