Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4153 domain-containing protein | NQ519_01820 | Q9CKY2 | Negative | 464493 - 466241 | 66884.2 |
| 23s rrna (guanosine(2251)-2'-o)-methyltransferase rlmb | NQ519_01825 | Q06753 | Negative | 466393 - 467130 | 26730.5 |
| abc-f family atp-binding cassette domain-containing protein | NQ519_01830 | Q9FIB4 | Negative | 467123 - 469075 | 74094.3 |
| hd domain-containing protein | NQ519_01835 | Q7Z4H3 | Positive | 469155 - 469715 | 21130.1 |
| ribulose-phosphate 3-epimerase | NQ519_01840 | P74061 | Negative | 469705 - 470355 | 22828.8 |
| abc transporter permease | NQ519_01845 | Not Available | Negative | 470518 - 471717 | 43333.9 |
| atp-binding cassette domain-containing protein | NQ519_01850 | P57030 | Negative | 471714 - 472361 | 23656.4 |
| duf4836 family protein | NQ519_01855 | Not Available | Negative | 472429 - 474003 | 55480.0 |
| dna recombination protein rmuc | NQ519_01860 | Q9JWG3 | Positive | 474160 - 475587 | 53862.7 |
| hypothetical protein | NQ519_01865 | Not Available | Negative | 475632 - 476183 | 20630.9 |
Pathways
1348 pathways
Health Effects
No health effects information available for this bacterium.
