Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf5627 domain-containing protein | LK406_03595 | Not Available | Negative | 895572 - 896594 | 38454.4 |
| ragb/susd family nutrient uptake outer membrane protein | LK406_03600 | Not Available | Negative | 896609 - 898303 | 63302.4 |
| susc/raga family tonb-linked outer membrane protein | LK406_03605 | T2KMI3 | Negative | 898315 - 901407 | 115676.0 |
| ragb/susd family nutrient uptake outer membrane protein | LK406_03610 | T2KN63 | Negative | 901426 - 903279 | 71035.0 |
| susc/raga family tonb-linked outer membrane protein | LK406_03615 | T2KPJ3 | Negative | 903292 - 906411 | 115241.0 |
| sulfatase | LK406_03620 | Q32KH5 | Negative | 906457 - 907848 | 51794.4 |
| duf4838 domain-containing protein | LK406_03625 | P0DW93 | Negative | 907880 - 911029 | 116614.0 |
| bacon domain-containing protein | LK406_03630 | Not Available | Negative | 911060 - 913324 | 78397.7 |
| hypothetical protein | LK406_03635 | P70744 | Negative | 913350 - 914906 | 57144.6 |
| adp-ribosylglycohydrolase family protein | LK406_03640 | Not Available | Negative | 914951 - 916699 | 64848.5 |
Pathways
1231 pathways
Health Effects
No health effects information available for this bacterium.
