Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2961 domain-containing protein | LK406_03545 | Not Available | Positive | 875139 - 876725 | 59083.8 |
| susc/raga family tonb-linked outer membrane protein | LK406_03550 | Q8A1G1 | Positive | 876743 - 879679 | 107786.0 |
| ragb/susd family nutrient uptake outer membrane protein | LK406_03555 | Q8A1G2 | Positive | 879691 - 881289 | 61651.3 |
| duf4185 domain-containing protein | LK406_03560 | E1ACQ5 | Positive | 881324 - 882889 | 57902.2 |
| duf4185 domain-containing protein | LK406_03565 | L7WU85 | Positive | 882935 - 884437 | 53926.2 |
| carbohydrate-binding protein | LK406_03570 | Not Available | Positive | 884509 - 885006 | 18556.4 |
| substrate-binding domain-containing protein | LK406_03575 | T2KMF4 | Positive | 885069 - 887747 | 101658.0 |
| metallophosphoesterase | LK406_03580 | O34986 | Negative | 887865 - 888842 | 36429.4 |
| sulfatase-like hydrolase/transferase | LK406_03585 | T2KPJ9 | Negative | 888944 - 892351 | 127033.0 |
| glycosyl hydrolase-related protein | LK406_03590 | Q9NTJ4 | Negative | 892384 - 895560 | 118490.0 |
Pathways
1231 pathways
Health Effects
No health effects information available for this bacterium.
