Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mobilization protein | LK406_03495 | Not Available | Positive | 863612 - 864031 | 16536.3 |
| relaxase/mobilization nuclease domain-containing protein | LK406_03500 | Not Available | Positive | 864016 - 865242 | 46988.9 |
| hypothetical protein | LK406_03505 | Not Available | Positive | 865617 - 866090 | 17433.8 |
| methyltransferase domain-containing protein | LK406_03510 | B6J5Y2 | Negative | 866083 - 866877 | 30390.0 |
| superoxide dismutase | LK406_03515 | P35835 | Negative | 867143 - 868078 | 32566.7 |
| tail fiber domain-containing protein | LK406_03520 | P07067 | Negative | 868755 - 869375 | 23247.7 |
| hypothetical protein | LK406_03525 | Not Available | Negative | 869517 - 869891 | 13515.5 |
| tetratricopeptide repeat protein | LK406_03530 | Not Available | Negative | 870170 - 871798 | 62756.4 |
| sugar porter family mfs transporter | LK406_03535 | P46333 | Positive | 872924 - 874252 | 47561.6 |
| carbohydrate kinase | LK406_03540 | O59128 | Positive | 874254 - 875114 | 31141.2 |
Pathways
1231 pathways
Health Effects
No health effects information available for this bacterium.
