Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1896 domain-containing protein | LK406_03445 | Not Available | Positive | 850772 - 851212 | 16994.0 |
| hypothetical protein | LK406_03450 | Not Available | Positive | 851199 - 851375 | 6243.54 |
| n-6 dna methylase | LK406_03455 | Q71TF8 | Positive | 851403 - 853307 | 71117.4 |
| dna helicase | LK406_03460 | Q71TF8 | Positive | 853509 - 856646 | 119195.0 |
| hypothetical protein | LK406_03465 | Not Available | Negative | 856698 - 857045 | 13728.9 |
| 5-dehydro-4-deoxy-d-glucuronate isomerase | LK406_03470 | Q8A2S4 | Positive | 857858 - 858700 | 31700.7 |
| gluconate 5-dehydrogenase | LK406_03475 | T2KLZ8 | Positive | 859022 - 859816 | 28262.3 |
| is982 family transposase | LK406_03480 | Not Available | Positive | 859930 - 860907 | 37342.0 |
| site-specific integrase | LK406_03485 | Q980D9 | Positive | 861150 - 862379 | 46925.8 |
| duf3408 domain-containing protein | LK406_03490 | Not Available | Negative | 862636 - 863154 | 19490.9 |
Pathways
1231 pathways
Health Effects
No health effects information available for this bacterium.
