Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4134 domain-containing protein | LK406_03395 | Not Available | Negative | 839351 - 839620 | 9377.41 |
| hypothetical protein | LK406_03400 | Not Available | Negative | 839809 - 840546 | 27323.6 |
| duf3408 domain-containing protein | LK406_03405 | Not Available | Negative | 840549 - 840932 | 14300.8 |
| para family protein | LK406_03410 | Q72H90 | Negative | 840925 - 841698 | 29092.4 |
| superoxide dismutase | LK406_03415 | Not Available | Positive | 842280 - 842705 | 16440.9 |
| relaxase/mobilization nuclease domain-containing protein | LK406_03420 | Not Available | Positive | 842690 - 843982 | 50097.2 |
| superoxide dismutase | LK406_03425 | Not Available | Positive | 844004 - 846019 | 75836.5 |
| sir2 family protein | LK406_03430 | P55385 | Positive | 846143 - 849274 | 119688.0 |
| hypothetical protein | LK406_03435 | Not Available | Positive | 849501 - 849731 | 8594.09 |
| duf3945 domain-containing protein | LK406_03440 | Not Available | Positive | 849864 - 850766 | 34095.9 |
Pathways
1231 pathways
Health Effects
No health effects information available for this bacterium.
