Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| integration host factor subunit beta | LK406_03345 | P19436 | Positive | 830982 - 831254 | 10096.3 |
| conjugative transposon protein tran | LK406_03350 | Not Available | Negative | 831440 - 832345 | 33431.6 |
| conjugative transposon protein tram | LK406_03355 | Not Available | Negative | 832353 - 833576 | 44180.6 |
| hypothetical protein | LK406_03360 | Not Available | Negative | 833557 - 833814 | 9709.0 |
| conjugative transposon protein trak | LK406_03365 | Not Available | Negative | 833804 - 834427 | 23877.5 |
| conjugative transposon protein traj | LK406_03370 | Not Available | Negative | 834441 - 835460 | 37265.9 |
| duf4141 domain-containing protein | LK406_03375 | Not Available | Negative | 835470 - 836102 | 23949.6 |
| hypothetical protein | LK406_03380 | Not Available | Positive | 836183 - 836527 | 12768.2 |
| trag family conjugative transposon atpase | LK406_03385 | Q6FYW7 | Negative | 836524 - 838959 | 93526.2 |
| duf4133 domain-containing protein | LK406_03390 | Not Available | Negative | 839033 - 839347 | 11444.6 |
Pathways
1231 pathways
Health Effects
No health effects information available for this bacterium.
