Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | LK406_03295 | T2KM18 | Negative | 820942 - 824412 | 128853.0 |
| fecr domain-containing protein | LK406_03300 | P23485 | Negative | 824541 - 825479 | 35564.4 |
| rna polymerase sigma-70 factor | LK406_03305 | P46358 | Negative | 825646 - 826305 | 25305.6 |
| hypothetical protein | LK406_03310 | Not Available | Negative | 826425 - 826898 | 18358.8 |
| fusion protein | LK406_03315 | Not Available | Positive | 826915 - 827919 | 37802.3 |
| hypothetical protein | LK406_03320 | Not Available | Positive | 827967 - 828224 | 9698.52 |
| hypothetical protein | LK406_03325 | Not Available | Positive | 828221 - 828451 | 9128.1 |
| parb/repb/spo0j family partition protein | LK406_03330 | P26497 | Positive | 828470 - 830194 | 64792.1 |
| hypothetical protein | LK406_03335 | Not Available | Positive | 830245 - 830508 | 9955.99 |
| hypothetical protein | LK406_03340 | Not Available | Positive | 830623 - 830865 | 9596.45 |
Pathways
1231 pathways
Health Effects
No health effects information available for this bacterium.
