Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| metallophosphoesterase | LK406_03245 | Not Available | Negative | 805849 - 807000 | 43205.3 |
| duf6528 family protein | LK406_03250 | Not Available | Negative | 807019 - 807987 | 35840.9 |
| beta-n-acetylhexosaminidase | LK406_03255 | P49008 | Negative | 808017 - 809636 | 61061.2 |
| glycoside hydrolase family 16 protein | LK406_03260 | Q9ZG90 | Negative | 809652 - 810485 | 31518.8 |
| duf4971 domain-containing protein | LK406_03265 | Q9ZG90 | Negative | 810491 - 811564 | 40063.5 |
| hypothetical protein | LK406_03270 | Not Available | Negative | 811588 - 813075 | 55792.8 |
| bacon domain-containing protein | LK406_03275 | Not Available | Negative | 813088 - 814608 | 55766.8 |
| ragb/susd family nutrient uptake outer membrane protein | LK406_03280 | T2KN63 | Negative | 814658 - 816346 | 64085.7 |
| susc/raga family tonb-linked outer membrane protein | LK406_03285 | T2KPJ3 | Negative | 816359 - 819133 | 102661.0 |
| ragb/susd family nutrient uptake outer membrane protein | LK406_03290 | T2KPM5 | Negative | 819163 - 820929 | 67292.9 |
Pathways
1231 pathways
Health Effects
No health effects information available for this bacterium.
