Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ompa family protein | LK406_03195 | Not Available | Negative | 789723 - 791378 | 64059.8 |
| duf3575 domain-containing protein | LK406_03200 | Not Available | Negative | 791384 - 791911 | 19975.6 |
| duf4906 domain-containing protein | LK406_03205 | Not Available | Negative | 791952 - 794090 | 77010.2 |
| fimb/mfa2 family fimbrial subunit | LK406_03210 | Not Available | Negative | 794166 - 794996 | 28845.8 |
| hypothetical protein | LK406_03215 | Not Available | Negative | 795006 - 795188 | 6354.36 |
| rtec domain-containing protein | LK406_03220 | Not Available | Negative | 795411 - 796010 | 23237.4 |
| duf4981 domain-containing protein | LK406_03225 | Q56307 | Negative | 796238 - 799351 | 118433.0 |
| glycoside hydrolase family 16 protein | LK406_03230 | Q9ZG90 | Negative | 799463 - 801175 | 64074.9 |
| glycoside hydrolase family 3 c-terminal domain-containing protein | LK406_03235 | P27034 | Negative | 801324 - 803789 | 91045.1 |
| hypothetical protein | LK406_03240 | Not Available | Negative | 803798 - 805843 | 76219.4 |
Pathways
1231 pathways
Health Effects
No health effects information available for this bacterium.
