Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | LK406_03145 | Not Available | Negative | 782707 - 782994 | 10473.3 |
| xre family transcriptional regulator | LK406_03150 | Q37906 | Positive | 783136 - 783807 | 25117.4 |
| hypothetical protein | LK406_03155 | Not Available | Negative | 784155 - 784418 | 10112.2 |
| site-specific integrase | LK406_03160 | A8F7B4 | Positive | 784965 - 786227 | 48917.5 |
| helix-turn-helix domain-containing protein | LK406_03165 | Not Available | Negative | 786270 - 786572 | 11977.5 |
| helix-turn-helix domain-containing protein | LK406_03170 | Not Available | Negative | 786574 - 786708 | 5386.51 |
| hypothetical protein | LK406_03175 | Not Available | Negative | 786882 - 787241 | 14002.1 |
| hypothetical protein | LK406_03180 | Not Available | Negative | 787364 - 788614 | 47124.9 |
| hypothetical protein | LK406_03185 | Not Available | Negative | 788621 - 788818 | 7387.88 |
| radical sam protein | LK406_03190 | Not Available | Negative | 788830 - 789720 | 34530.5 |
Pathways
1231 pathways
Health Effects
No health effects information available for this bacterium.
