Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amidohydrolase | LK406_03095 | A5D1G6 | Negative | 769142 - 770455 | 46758.1 |
| duf1573 domain-containing protein | LK406_03100 | Not Available | Negative | 770456 - 770899 | 16003.5 |
| energy transducer tonb | LK406_03105 | Not Available | Negative | 770910 - 771605 | 24590.9 |
| biopolymer transporter exbd | LK406_03110 | Q9ZHV9 | Negative | 771721 - 772125 | 14720.1 |
| mota/tolq/exbb proton channel family protein | LK406_03115 | O27101 | Negative | 772132 - 772806 | 24488.6 |
| translocation/assembly module tamb | LK406_03120 | Not Available | Negative | 773011 - 777606 | 169423.0 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex transferase subunit tsad | LK406_03125 | Q7MU42 | Positive | 777668 - 778690 | 36682.2 |
| transcriptional regulator | LK406_03130 | Not Available | Positive | 779250 - 779528 | 10548.5 |
| nitronate monooxygenase family protein | LK406_03135 | P71847 | Negative | 779603 - 780691 | 39318.6 |
| phage terminase large subunit | LK406_03140 | Q9P9T5 | Negative | 781056 - 782585 | 57038.7 |
Pathways
1231 pathways
Health Effects
No health effects information available for this bacterium.
