Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| susc/raga family tonb-linked outer membrane protein | LK406_02995 | T2KM18 | Positive | 733210 - 736521 | 121796.0 |
| ragb/susd family nutrient uptake outer membrane protein | LK406_03000 | T2KNB8 | Positive | 736540 - 738039 | 56959.8 |
| bacon domain-containing protein | LK406_03005 | Not Available | Positive | 738058 - 739083 | 36776.9 |
| hypothetical protein | LK406_03010 | Not Available | Positive | 739104 - 740660 | 56008.6 |
| duf5689 domain-containing protein | LK406_03015 | Not Available | Positive | 740686 - 742962 | 84054.7 |
| beta-n-acetylhexosaminidase | LK406_03020 | P49008 | Positive | 743027 - 744607 | 59820.9 |
| duf4981 domain-containing protein | LK406_03025 | Q56307 | Positive | 744622 - 747738 | 116842.0 |
| ragb/susd family nutrient uptake outer membrane protein | LK406_03030 | T2KN63 | Negative | 747823 - 749466 | 62524.7 |
| tonb-dependent receptor | LK406_03035 | T2KPJ3 | Negative | 749479 - 752634 | 116427.0 |
| duf4958 family protein | LK406_03040 | Not Available | Negative | 752655 - 754823 | 77872.2 |
Pathways
1231 pathways
Health Effects
No health effects information available for this bacterium.
