Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rok family protein | LK406_02945 | P0A4E1 | Negative | 716933 - 717871 | 32068.7 |
| tat pathway signal sequence | LK406_02950 | Not Available | Negative | 717874 - 719517 | 61497.2 |
| sulfatase | LK406_02955 | Q89YS5 | Negative | 719542 - 721212 | 64246.4 |
| sulfatase-like hydrolase/transferase | LK406_02960 | Q8A7C8 | Negative | 721234 - 722637 | 51638.1 |
| heparinase ii/iii family protein | LK406_02965 | C7EXL6 | Positive | 722915 - 724852 | 75145.4 |
| heparinase ii/iii family protein | LK406_02970 | C7EXL6 | Positive | 724858 - 726861 | 76187.2 |
| polysaccharide lyase | LK406_02975 | Q05819 | Positive | 726863 - 727996 | 42684.4 |
| duf6377 domain-containing protein | LK406_02980 | Not Available | Negative | 728048 - 729715 | 65138.4 |
| calcineurin-like phosphoesterase family protein | LK406_02985 | Not Available | Positive | 729976 - 731562 | 57913.8 |
| calcineurin-like phosphoesterase family protein | LK406_02990 | Q58DC0 | Positive | 731592 - 733178 | 60410.7 |
Pathways
1231 pathways
Health Effects
No health effects information available for this bacterium.
