Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | LK406_02895 | Not Available | Positive | 702237 - 702536 | 11558.2 |
| helix-turn-helix domain-containing protein | LK406_02900 | Not Available | Positive | 702570 - 702869 | 11478.0 |
| sir2 family protein | LK406_02905 | P55385 | Negative | 703021 - 705729 | 104132.0 |
| hypothetical protein | LK406_02910 | Not Available | Negative | 705784 - 706137 | 13333.6 |
| superoxide dismutase | LK406_02915 | Not Available | Negative | 706331 - 706654 | 11777.5 |
| site-specific integrase | LK406_02920 | Q71Y59 | Negative | 706730 - 707962 | 47706.1 |
| ribosome biogenesis gtp-binding protein yiha/ysxc | LK406_02925 | A6L4J3 | Positive | 708442 - 709038 | 22472.3 |
| ribose-phosphate pyrophosphokinase | LK406_02930 | Q7MT83 | Positive | 709201 - 710142 | 34221.6 |
| helix-turn-helix domain-containing protein | LK406_02935 | T2KMF4 | Negative | 710233 - 714270 | 149610.0 |
| duf4962 domain-containing protein | LK406_02940 | Not Available | Negative | 714399 - 716936 | 94867.6 |
Pathways
1231 pathways
Health Effects
No health effects information available for this bacterium.
