Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arginine decarboxylase | LK406_02845 | O23141 | Positive | 691801 - 693195 | 54013.1 |
| acyloxyacyl hydrolase | LK406_02850 | Not Available | Positive | 693341 - 694771 | 52719.4 |
| linear amide c-n hydrolase | LK406_02855 | P54965 | Negative | 694824 - 695867 | 38047.3 |
| rtec domain-containing protein | LK406_02860 | Not Available | Negative | 696227 - 696814 | 23421.1 |
| superoxide dismutase | LK406_02865 | B2UN92 | Negative | 696920 - 697162 | 9057.8 |
| arylamine n-acetyltransferase | LK406_02870 | P0A5L9 | Negative | 697321 - 698115 | 31116.3 |
| pyridoxamine 5'-phosphate oxidase family protein | LK406_02875 | Not Available | Negative | 698116 - 698595 | 18447.0 |
| yggs family pyridoxal phosphate-dependent enzyme | LK406_02880 | O66631 | Negative | 698624 - 699295 | 25426.5 |
| pyridoxamine 5'-phosphate oxidase family protein | LK406_02885 | Not Available | Negative | 699300 - 699761 | 17185.4 |
| plp-dependent aminotransferase family protein | LK406_02890 | P49309 | Positive | 699848 - 701272 | 54012.2 |
Pathways
1231 pathways
Health Effects
No health effects information available for this bacterium.
