Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf5125 domain-containing protein | LK406_02795 | Not Available | Negative | 677620 - 679650 | 72178.5 |
| glucosylceramidase | LK406_02800 | Q4WBR2 | Negative | 679672 - 681180 | 55230.8 |
| ragb/susd family nutrient uptake outer membrane protein | LK406_02805 | T2KPM5 | Negative | 681203 - 682747 | 58413.5 |
| tonb-dependent receptor | LK406_02810 | T2KPJ3 | Negative | 682770 - 685805 | 111366.0 |
| duf6377 domain-containing protein | LK406_02815 | Not Available | Positive | 686431 - 688092 | 64093.8 |
| preprotein translocase subunit secg | LK406_02820 | Not Available | Negative | 688230 - 688598 | 12972.9 |
| hypothetical protein | LK406_02825 | Not Available | Negative | 688610 - 689098 | 17998.3 |
| lps assembly lipoprotein lpte | LK406_02830 | Not Available | Negative | 689106 - 689594 | 17572.7 |
| sigma-54 dependent transcriptional regulator | LK406_02835 | P45671 | Negative | 689669 - 690892 | 45329.7 |
| hypothetical protein | LK406_02840 | Not Available | Negative | 690893 - 691582 | 24997.1 |
Pathways
1231 pathways
Health Effects
No health effects information available for this bacterium.
