Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| multidrug efflux smr transporter | LK406_02745 | Q8D1E4 | Negative | 666257 - 666604 | 12873.5 |
| molecular chaperone dnak | LK406_02750 | A6LDG8 | Negative | 666702 - 668597 | 68089.8 |
| dna-binding protein | LK406_02755 | Not Available | Negative | 669433 - 669669 | 8646.3 |
| hypothetical protein | LK406_02760 | Not Available | Negative | 669864 - 671459 | 59088.0 |
| hypothetical protein | LK406_02765 | Not Available | Negative | 671492 - 672085 | 22297.2 |
| holliday junction branch migration protein ruva | LK406_02770 | A6L0X5 | Negative | 672249 - 672836 | 20839.5 |
| omph family outer membrane protein | LK406_02775 | Not Available | Positive | 672936 - 673523 | 21308.2 |
| diadenylate cyclase cdaa | LK406_02780 | Q45589 | Positive | 673887 - 674687 | 29410.4 |
| gnat family n-acetyltransferase | LK406_02785 | Q9HX72 | Positive | 674723 - 675256 | 20050.9 |
| glycoside hydrolase family 3 c-terminal domain-containing protein | LK406_02790 | A7LXS8 | Negative | 675308 - 677542 | 80869.6 |
Pathways
1231 pathways
Health Effects
No health effects information available for this bacterium.
