Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3459 domain-containing protein | LK406_02595 | L8B068 | Negative | 629197 - 630468 | 48361.1 |
| glycoside hydrolase family 65 protein | LK406_02600 | E6ENP7 | Negative | 630472 - 632760 | 86158.7 |
| beta-phosphoglucomutase | LK406_02605 | O06995 | Negative | 632742 - 633398 | 22805.4 |
| m64 family metallo-endopeptidase | LK406_02610 | Not Available | Negative | 633473 - 635050 | 57773.1 |
| hypothetical protein | LK406_02615 | Not Available | Negative | 635160 - 636449 | 46207.0 |
| hypothetical protein | LK406_02620 | Not Available | Negative | 636483 - 636698 | 7806.08 |
| ragb/susd family nutrient uptake outer membrane protein | LK406_02625 | Not Available | Negative | 636710 - 638128 | 53897.3 |
| susc/raga family tonb-linked outer membrane protein | LK406_02630 | T2KM18 | Negative | 638141 - 641464 | 122603.0 |
| zinc-dependent metalloprotease | LK406_02635 | Not Available | Negative | 641499 - 643928 | 90092.4 |
| zinc-dependent metalloprotease | LK406_02640 | Not Available | Negative | 643937 - 646477 | 95731.8 |
Pathways
1231 pathways
Health Effects
No health effects information available for this bacterium.
