Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| shikimate kinase | LK406_02545 | A6LFQ8 | Negative | 615580 - 616107 | 19578.6 |
| dna gyrase/topoisomerase iv subunit a | LK406_02550 | O51066 | Negative | 616121 - 618985 | 107400.0 |
| type iia dna topoisomerase subunit b | LK406_02555 | Q59189 | Negative | 619020 - 620891 | 70252.6 |
| 1-acyl-sn-glycerol-3-phosphate acyltransferase | LK406_02560 | Q95JH0 | Negative | 621016 - 621759 | 28347.2 |
| tonb-dependent receptor | LK406_02565 | Not Available | Positive | 622039 - 624399 | 87882.9 |
| dmt family transporter | LK406_02570 | P42243 | Negative | 624465 - 625454 | 35620.0 |
| lema family protein | LK406_02575 | A8AVK0 | Negative | 625455 - 626030 | 21302.1 |
| tpm domain-containing protein | LK406_02580 | P55140 | Negative | 626051 - 626947 | 31239.7 |
| hypothetical protein | LK406_02585 | Not Available | Negative | 627079 - 627882 | 30665.1 |
| sgnh/gdsl hydrolase family protein | LK406_02590 | Not Available | Negative | 628327 - 629172 | 30775.7 |
Pathways
1231 pathways
Health Effects
No health effects information available for this bacterium.
