Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar kinase | LK406_02495 | D4GSE6 | Negative | 601406 - 602425 | 37147.9 |
| glucuronate isomerase | LK406_02500 | A6L4U4 | Negative | 602440 - 603852 | 54824.9 |
| duf4861 domain-containing protein | LK406_02505 | T2KN67 | Positive | 604057 - 605181 | 41119.7 |
| sugar kinase | LK406_02510 | D4GSE6 | Positive | 605350 - 606396 | 38272.4 |
| tetratricopeptide repeat protein | LK406_02515 | Q64112 | Negative | 606604 - 607965 | 50568.1 |
| dna gyrase subunit a | LK406_02520 | P0C0R0 | Negative | 608003 - 610555 | 94850.0 |
| hypothetical protein | LK406_02525 | Not Available | Negative | 610845 - 611063 | 8313.51 |
| hypothetical protein | LK406_02530 | Not Available | Negative | 611069 - 611653 | 21095.9 |
| dna translocase ftsk 4tm domain-containing protein | LK406_02535 | Q8KBK0 | Negative | 611763 - 614567 | 101817.0 |
| glutamate racemase | LK406_02540 | A5UTG1 | Negative | 614769 - 615566 | 28383.2 |
Pathways
1231 pathways
Health Effects
No health effects information available for this bacterium.
