Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arac family transcriptional regulator | LK406_02445 | P96660 | Negative | 587446 - 588321 | 33198.1 |
| nitroreductase family protein | LK406_02450 | O26223 | Positive | 588440 - 589066 | 23543.5 |
| rrna pseudouridine synthase | LK406_02455 | P35159 | Negative | 589218 - 590516 | 49980.2 |
| mate family efflux transporter | LK406_02460 | P28303 | Positive | 590659 - 591984 | 48743.6 |
| fimbrillin family protein | LK406_02465 | Not Available | Positive | 592054 - 594759 | 98253.5 |
| pectinesterase family protein | LK406_02470 | Q9FM79 | Negative | 594774 - 595895 | 41943.6 |
| altronate dehydratase family protein | LK406_02475 | O34673 | Negative | 595903 - 597393 | 54164.6 |
| tagaturonate reductase | LK406_02480 | Q97L67 | Negative | 597533 - 598990 | 55544.8 |
| mfs transporter | LK406_02485 | P0AA79 | Negative | 599010 - 600473 | 54023.6 |
| bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | LK406_02490 | P0A957 | Negative | 600579 - 601247 | 23941.2 |
Pathways
1231 pathways
Health Effects
No health effects information available for this bacterium.
