Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aldo/keto reductase | LK406_02395 | P54569 | Positive | 579166 - 580575 | 52973.3 |
| iron-containing alcohol dehydrogenase | LK406_02400 | A4ISB9 | Positive | 580597 - 581694 | 40538.4 |
| aldo/keto reductase | LK406_02405 | A2XRZ0 | Positive | 581720 - 582721 | 37086.5 |
| helix-turn-helix domain-containing protein | LK406_02410 | Q52620 | Positive | 582888 - 583694 | 31202.4 |
| helix-turn-helix transcriptional regulator | LK406_02415 | O27346 | Negative | 583797 - 584144 | 12984.9 |
| nuclear transport factor 2 family protein | LK406_02420 | Not Available | Positive | 584295 - 584678 | 14225.8 |
| nuclear transport factor 2 family protein | LK406_02425 | Not Available | Positive | 584709 - 585059 | 12703.2 |
| bifunctional helix-turn-helix transcriptional regulator/gnat family n-acetyltransferase | LK406_02430 | P39337 | Positive | 585320 - 586273 | 35867.3 |
| 3-methyl-2-oxobutanoate hydroxymethyltransferase | LK406_02435 | A5FAQ5 | Positive | 586283 - 587095 | 29277.5 |
| cupin domain-containing protein | LK406_02440 | Not Available | Positive | 587117 - 587455 | 12565.0 |
Pathways
1231 pathways
Health Effects
No health effects information available for this bacterium.
