Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| superoxide dismutase | LK406_02245 | Q8ZKR2 | Negative | 549505 - 549798 | 10760.8 |
| relaxase/mobilization nuclease domain-containing protein | LK406_02250 | Not Available | Negative | 549870 - 550286 | 16247.1 |
| hypothetical protein | LK406_02255 | Not Available | Negative | 550271 - 550501 | 8997.08 |
| maturase | LK406_02260 | P0A3U0 | Negative | 550539 - 552347 | 70640.6 |
| hypothetical protein | LK406_02265 | Not Available | Negative | 552893 - 553180 | 11297.8 |
| duf3408 domain-containing protein | LK406_02270 | Not Available | Positive | 553637 - 554134 | 18941.6 |
| site-specific integrase | LK406_02275 | Q980D9 | Negative | 554431 - 555660 | 47241.0 |
| duf1273 domain-containing protein | LK406_02280 | A0RC08 | Negative | 555942 - 556451 | 18403.2 |
| ytxh domain-containing protein | LK406_02285 | Not Available | Positive | 556521 - 556730 | 7563.28 |
| hypothetical protein | LK406_02290 | Not Available | Positive | 556744 - 557079 | 12283.2 |
Pathways
1231 pathways
Health Effects
No health effects information available for this bacterium.
