Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pepsy-associated tm helix domain-containing protein | LK406_02195 | Not Available | Positive | 538973 - 539533 | 21282.1 |
| duf4857 domain-containing protein | LK406_02200 | Not Available | Negative | 539606 - 540829 | 46575.9 |
| hypothetical protein | LK406_02205 | Not Available | Negative | 540849 - 541520 | 25500.6 |
| abc transporter atp-binding protein | LK406_02210 | P54591 | Negative | 541530 - 542417 | 33361.4 |
| duf4876 domain-containing protein | LK406_02215 | Not Available | Negative | 542440 - 543651 | 44112.4 |
| hypothetical protein | LK406_02220 | Not Available | Negative | 543695 - 545197 | 56146.4 |
| hypothetical protein | LK406_02225 | Not Available | Negative | 545200 - 545583 | 14408.3 |
| carboxypeptidase regulatory-like domain-containing protein | LK406_02230 | Not Available | Negative | 545594 - 548386 | 104792.0 |
| flavodoxin | LK406_02235 | P61951 | Positive | 548605 - 549096 | 17168.9 |
| duf2023 family protein | LK406_02240 | Not Available | Positive | 549099 - 549479 | 14341.4 |
Pathways
1231 pathways
Health Effects
No health effects information available for this bacterium.
