Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rtec domain-containing protein | LK406_02145 | Not Available | Negative | 528036 - 528881 | 33231.9 |
| cytidylate kinase family protein | LK406_02150 | Not Available | Negative | 529433 - 530758 | 50059.0 |
| lysr family transcriptional regulator | LK406_02155 | Q8X4M5 | Positive | 530863 - 531789 | 34915.6 |
| n-acetyltransferase family protein | LK406_02160 | P31668 | Positive | 531786 - 532268 | 18440.4 |
| mfs transporter | LK406_02165 | P94577 | Positive | 532423 - 533613 | 43688.0 |
| cold-shock protein | LK406_02170 | O54310 | Positive | 534475 - 534675 | 7195.62 |
| 6-phosphofructokinase | LK406_02175 | A2EF58 | Positive | 534834 - 536069 | 45343.7 |
| hypothetical protein | LK406_02180 | Not Available | Positive | 536157 - 537047 | 32732.7 |
| metal-transporting atpase | LK406_02185 | P37279 | Positive | 537502 - 538161 | 23930.4 |
| ob-fold nucleic acid binding domain-containing protein | LK406_02190 | Not Available | Positive | 538346 - 538939 | 21520.4 |
Pathways
1231 pathways
Health Effects
No health effects information available for this bacterium.
