Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tigr04133 family radical sam/spasm protein | LK406_02095 | Q46CH7 | Negative | 515891 - 516964 | 40787.9 |
| hypothetical protein | LK406_02100 | Not Available | Negative | 516968 - 517234 | 9605.62 |
| site-specific integrase | LK406_02105 | Q7ZAJ8 | Positive | 517737 - 518957 | 46241.8 |
| site-specific integrase | LK406_02110 | Q980D9 | Positive | 518981 - 520261 | 49756.3 |
| uvrd-helicase domain-containing protein | LK406_02115 | P0DW48 | Negative | 520678 - 522522 | 70232.1 |
| atp-dependent endonuclease | LK406_02120 | P0DW47 | Negative | 522531 - 524681 | 83291.6 |
| pddexk nuclease domain-containing protein | LK406_02125 | P45423 | Negative | 524698 - 525732 | 40344.8 |
| duf2971 domain-containing protein | LK406_02130 | Not Available | Negative | 525795 - 526556 | 29489.6 |
| helix-turn-helix transcriptional regulator | LK406_02135 | Q5WNW9 | Negative | 526564 - 526767 | 7781.59 |
| moba protein | LK406_02140 | Not Available | Positive | 527607 - 528029 | 16234.7 |
Pathways
1231 pathways
Health Effects
No health effects information available for this bacterium.
