Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycoside hydrolase family 88 protein | LK406_02045 | T2KLZ3 | Negative | 502967 - 504139 | 44148.5 |
| is982 family transposase | LK406_02050 | Not Available | Positive | 504531 - 505508 | 37342.0 |
| duf3575 domain-containing protein | LK406_02055 | Not Available | Positive | 506232 - 506813 | 21890.3 |
| duf3868 domain-containing protein | LK406_02060 | Not Available | Positive | 506826 - 508244 | 53287.1 |
| mfa1 family fimbria major subunit | LK406_02065 | Not Available | Positive | 508276 - 509979 | 62769.2 |
| fimb/mfa2 family fimbrial subunit | LK406_02070 | Not Available | Positive | 510109 - 511194 | 40396.4 |
| hypothetical protein | LK406_02075 | Not Available | Positive | 511207 - 512379 | 43318.8 |
| duf4906 domain-containing protein | LK406_02080 | Not Available | Positive | 512376 - 515489 | 116243.0 |
| Trna-pro | Not Available | Not Available | Positive | 515576 - 515652 | Not Available |
| Trna-pro | Not Available | Not Available | Positive | 515708 - 515785 | Not Available |
Pathways
1231 pathways
Health Effects
No health effects information available for this bacterium.
