Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyltransferase | LK406_01995 | Not Available | Negative | 486261 - 487316 | 40459.1 |
| arylsulfatase | LK406_02000 | P15289 | Negative | 487303 - 488847 | 57986.2 |
| alginate lyase family protein | LK406_02005 | Q4KHY5 | Negative | 488858 - 490057 | 45857.5 |
| endonuclease/exonuclease/phosphatase family protein | LK406_02010 | Q5UQW5 | Negative | 490070 - 490993 | 34689.5 |
| endonuclease/exonuclease/phosphatase family protein | LK406_02015 | Not Available | Negative | 491049 - 492026 | 37041.6 |
| duf1735 domain-containing protein | LK406_02020 | Not Available | Negative | 492036 - 493082 | 38758.3 |
| ragb/susd family nutrient uptake outer membrane protein | LK406_02025 | T2KPM5 | Negative | 493097 - 494869 | 66414.5 |
| susc/raga family tonb-linked outer membrane protein | LK406_02030 | T2KM18 | Negative | 494882 - 497755 | 105818.0 |
| ragb/susd family nutrient uptake outer membrane protein | LK406_02035 | T2KN63 | Negative | 497772 - 499640 | 70599.1 |
| tonb-dependent receptor | LK406_02040 | T2KMI3 | Negative | 499652 - 502801 | 117095.0 |
Pathways
1231 pathways
Health Effects
No health effects information available for this bacterium.
