Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| zinc-dependent metalloprotease | LK406_01945 | Not Available | Negative | 469768 - 472419 | 99446.7 |
| hypothetical protein | LK406_01950 | Not Available | Negative | 472438 - 474105 | 60565.8 |
| duf4843 domain-containing protein | LK406_01955 | Not Available | Negative | 474118 - 474816 | 25848.3 |
| ragb/susd family nutrient uptake outer membrane protein | LK406_01960 | T2KN63 | Negative | 474825 - 476327 | 56374.6 |
| susc/raga family tonb-linked outer membrane protein | LK406_01965 | T2KM18 | Negative | 476340 - 479762 | 128018.0 |
| duf4974 domain-containing protein | LK406_01970 | Not Available | Negative | 479832 - 481007 | 43481.5 |
| sigma-70 family rna polymerase sigma factor | LK406_01975 | Q45585 | Negative | 481102 - 481605 | 19391.3 |
| had family phosphatase | LK406_01980 | Q8A947 | Positive | 481946 - 482587 | 24159.9 |
| duf748 domain-containing protein | LK406_01985 | Not Available | Positive | 482571 - 484940 | 87063.3 |
| duf2264 domain-containing protein | LK406_01990 | Not Available | Negative | 485033 - 486256 | 45235.3 |
Pathways
1231 pathways
Health Effects
No health effects information available for this bacterium.
