Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | LK406_01895 | Not Available | Positive | 458815 - 459099 | 10763.9 |
| glycosyltransferase | LK406_01900 | P26402 | Negative | 459084 - 460073 | 37678.8 |
| hypothetical protein | LK406_01905 | Not Available | Positive | 460168 - 460632 | 16719.4 |
| methylmalonyl co-a mutase-associated gtpase meab | LK406_01910 | P9WPZ0 | Positive | 460639 - 461766 | 41594.5 |
| nad-dependent deacylase | LK406_01915 | Q9ZAB8 | Negative | 461848 - 462561 | 25956.0 |
| glutamate decarboxylase | LK406_01920 | Q928R9 | Positive | 462658 - 464073 | 54113.3 |
| duf1295 domain-containing protein | LK406_01925 | Q28891 | Positive | 464247 - 465008 | 29136.8 |
| nadh:flavin oxidoreductase | LK406_01930 | A0A0N9HP11 | Positive | 465053 - 466267 | 44975.5 |
| sdr family nad(p)-dependent oxidoreductase | LK406_01935 | B2WMJ3 | Positive | 466267 - 467079 | 30166.0 |
| zinc-dependent metalloprotease | LK406_01940 | Not Available | Negative | 467141 - 469756 | 96289.4 |
Pathways
1231 pathways
Health Effects
No health effects information available for this bacterium.
