Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadh:ubiquinone reductase (na(+)-transporting) subunit f | LK406_01745 | Q02PF8 | Negative | 423736 - 424998 | 46470.5 |
| nadh:ubiquinone reductase (na(+)-transporting) subunit e | LK406_01750 | B4EUT8 | Negative | 425022 - 425630 | 21983.7 |
| nadh:ubiquinone reductase (na(+)-transporting) subunit d | LK406_01755 | A4Y3Y9 | Negative | 425642 - 426289 | 23454.6 |
| nadh:ubiquinone reductase (na(+)-transporting) subunit c | LK406_01760 | Q9JVQ0 | Negative | 426291 - 427142 | 30478.4 |
| nadh:ubiquinone reductase (na(+)-transporting) subunit b | LK406_01765 | Q1QX85 | Negative | 427155 - 428264 | 39797.1 |
| na(+)-translocating nadh-quinone reductase subunit a | LK406_01770 | Q2SIQ1 | Negative | 428285 - 429640 | 49866.4 |
| tatd family hydrolase | LK406_01775 | P73335 | Positive | 429959 - 430549 | 21842.1 |
| trna threonylcarbamoyladenosine dehydratase | LK406_01780 | O32037 | Positive | 430542 - 431267 | 26093.9 |
| hydroxyacid dehydrogenase | LK406_01785 | P45250 | Positive | 431353 - 432291 | 33655.4 |
| prolyl-trna synthetase associated domain-containing protein | LK406_01790 | Q9L4Q7 | Positive | 432293 - 432808 | 20348.1 |
Pathways
1231 pathways
Health Effects
No health effects information available for this bacterium.
