Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf5689 domain-containing protein | LK406_01695 | Not Available | Positive | 404820 - 407246 | 88523.9 |
| hypothetical protein | LK406_01700 | Not Available | Positive | 407258 - 409468 | 82461.7 |
| beta-n-acetylhexosaminidase | LK406_01705 | P49008 | Positive | 409540 - 411126 | 60199.3 |
| glycoside hydrolase family 3 c-terminal domain-containing protein | LK406_01710 | A7LXS8 | Negative | 411190 - 413286 | 77108.2 |
| duf5689 domain-containing protein | LK406_01715 | Not Available | Negative | 413360 - 415582 | 78806.2 |
| endonuclease/exonuclease/phosphatase family protein | LK406_01720 | Not Available | Negative | 415589 - 416464 | 32396.1 |
| ragb/susd family nutrient uptake outer membrane protein | LK406_01725 | T2KNB8 | Negative | 416489 - 418243 | 66097.9 |
| tonb-dependent receptor | LK406_01730 | T2KM18 | Negative | 418257 - 421760 | 130521.0 |
| fecr domain-containing protein | LK406_01735 | Not Available | Negative | 421983 - 422966 | 37685.0 |
| rna polymerase sigma-70 factor | LK406_01740 | Q06198 | Negative | 423036 - 423587 | 21683.1 |
Pathways
1231 pathways
Health Effects
No health effects information available for this bacterium.
