Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| s1/p1 nuclease | LK406_01645 | Q9C9G4 | Positive | 388437 - 389228 | 30422.3 |
| mfs transporter | LK406_01650 | Q9Z7N9 | Positive | 389250 - 390620 | 49072.3 |
| sodium-translocating pyrophosphatase | LK406_01655 | Q8A294 | Negative | 390678 - 392894 | 76910.6 |
| endonuclease/exonuclease/phosphatase family protein | LK406_01660 | Not Available | Negative | 393007 - 393918 | 34687.2 |
| duf6377 domain-containing protein | LK406_01665 | Not Available | Negative | 393918 - 395612 | 64514.8 |
| hypothetical protein | LK406_01670 | Not Available | Positive | 395923 - 397038 | 41637.5 |
| duf5689 domain-containing protein | LK406_01675 | Not Available | Positive | 397060 - 399174 | 77371.5 |
| endonuclease/exonuclease/phosphatase family protein | LK406_01680 | Not Available | Positive | 399188 - 400141 | 36066.3 |
| tonb-dependent receptor | LK406_01685 | T2KM18 | Positive | 400155 - 403259 | 115041.0 |
| ragb/susd family nutrient uptake outer membrane protein | LK406_01690 | T2KNB8 | Positive | 403274 - 404791 | 57910.2 |
Pathways
1231 pathways
Health Effects
No health effects information available for this bacterium.
