Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2776 domain-containing protein | LK406_01595 | P37630 | Positive | 365277 - 366323 | 36859.1 |
| rna polymerase sigma-70 factor | LK406_01600 | O05409 | Positive | 366500 - 367057 | 21670.3 |
| fecr domain-containing protein | LK406_01605 | Not Available | Positive | 367185 - 368177 | 37263.2 |
| tonb-dependent receptor | LK406_01610 | T2KM18 | Positive | 368404 - 371907 | 129887.0 |
| ragb/susd family nutrient uptake outer membrane protein | LK406_01615 | T2KNB8 | Positive | 371927 - 373681 | 65725.1 |
| phosphodiester glycosidase family protein | LK406_01620 | Not Available | Positive | 373714 - 377028 | 117378.0 |
| hypothetical protein | LK406_01625 | Not Available | Positive | 377048 - 379504 | 86097.1 |
| duf4886 domain-containing protein | LK406_01630 | Not Available | Positive | 379523 - 383758 | 147771.0 |
| bacon domain-containing protein | LK406_01635 | Not Available | Positive | 383771 - 387481 | 130761.0 |
| glycerophosphodiester phosphodiesterase family protein | LK406_01640 | Q9JL55 | Positive | 387560 - 388417 | 32135.0 |
Pathways
1231 pathways
Health Effects
No health effects information available for this bacterium.
